rs47910743 SNP Detail

Summary

• ID
  rs47910743
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:49011781 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGCAGAGAT GACATCTGAA GTTGACCTCT GGCCTACACT
  TATACACCAA TTTCCACACT AAATCCCTCT TATGCACCCC AGCAGACACA CAAGAACCTT
  S
  TCCTTGGGAC ACCATTCTCT ATGCTACACT ATGCCATTTC ACCTGGAGGG ACTGTTACTT
  GGCAGAAGGT GTCCAAACTC TTGTTTGTTT GTTTTTTGT                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	SM/J	WSB/EiJ
ss62763269	NES17343755	PERLEGEN	MM_PANEL2	f	SNP	C		C	C	C	C	C	C	C	G	C		G		C
ss145722337	ENSMUSSNP5386621	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C						C
ss325410137	CHEV_17_48844078	CHEVERUD	SCREENING_POP	f	SNP												C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	SM/J	WSB/EiJ
rs47910743					SNP	C	C	C	C	C	C	C	C	C	G	C	C	G	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62763269	NES17343755	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:49011781 () rs orientation: forward

Symbol	Name	Function Class
D17Dcr13	DNA Segment, Chr 17, Derry C. Roopenian 13	1559 bp proximal
D17Mit178	DNA segment, Chr 17, Massachusetts Institute of Technology 178	1559 bp proximal