rs47916494 SNP Detail

Summary

• ID
  rs47916494
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:41655721 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CGTTAAGTT ATTTTGTTAA CTTCTCCTGT
  GCGCACATGC GCTCATGCCT ATGTGTTTGT GAGAACGTCC CTGCTTGTTG CAGGGCTAGA
  GCCCCAGCAC AGCGAATGAC AAACGGCTGG TGGAGTTTTC GCTGTGCTTT GGTTTGGCAG
  W
  AGCTGCTTCC GTCGTGTGTG GAGAGACTTT CCTCATCCCC CCCAAACCCT CCACTTGTCT
  GCCAATATTT GATATCCCTT CTTCTGTCTT GTTTATTTTG TTTGTGGTAA ATTATCCTTT
  TGGCAATGAG CCCTTGAAAC AGACTTCACA                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss148992982	ENSMUSSNP4685437	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T
ss319700302	CHEV_1_41673406	CHEVERUD	SCREENING_POP	f	SNP			T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs47916494					SNP	A	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:41655721 () rs orientation: forward

Symbol	Name	Function Class
Gm70758	predicted gene, 70758	1029 bp downstream