rs47917277 SNP Detail

Summary

• ID
  rs47917277
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:84325397 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AACAAAGAAG CAGATTCTCT CTTGTGGTAG ACAGAGGCCA
  TTATAGAAAG CCATGACTGT TGAAAATGCA GAGAACAGCC GGGGCGTGGT GGCACACGCC
  W
  TTAATCCCAG CACTCGGGAA GCAGAGGCAG GCAGATTTCG GAGTTTGAGG TCAGCCTGGT
  CTACAAAGTA AGTTCCAGGA CAGTCAGGGC TACACAGAG                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145357719	ENSMUSSNP6802136	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
ss322745015	CHEV_8_86122667	CHEVERUD	SCREENING_POP	f	SNP				T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47917277					SNP	T	T	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84325397 () rs orientation: forward

Symbol	Name	Function Class
D830024N08Rik	RIKEN cDNA D830024N08 gene	1457 bp downstream
Gm18001	predicted gene, 18001	1245 bp upstream
Gm42029	predicted gene, 42029	1067 bp downstream