rs47927334 SNP Detail

Summary

• ID
  rs47927334
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:23117059 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T CATTTCTCCC ATACTCTTCC TGGTAGGAAG TCTTTCCTTC
  TTGGGGTGAG TTCATTATGA TAGCCCAGTG CTAATTTACT TTTAGCAACC AAGCAAGCCC
  A
  CAAGTAAAGA TTAAAGGTAA GAGACTAAAT TAGGCTCTGC TTGGTCTTTT ATTTTGTCTT
  GTCTGAATTG ACCCTGAAAT TTAGCATCTA TACAGCATGG T                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss136227439	ENSMUSSNP29411	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs47927334					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:23117059 () rs orientation: forward

Symbol	Name	Function Class
Gm68239	predicted gene, 68239	within coordinates
Rr675323	regulatory region 675323	1389 bp distal
Rr675324	regulatory region 675324	458 bp distal