rs47929446 SNP Detail

Summary

• ID
  rs47929446
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:191477075 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T GGGTATGGCT GCATGCATCT GGTAGCTCAT CTGGGGAGGA
  GAAAACAGGC CTACTAAACA GCCAGTCTAG CCAATTGATG AGCCTCCAGG TTCATTGATA
  Y
  ACCCTCTCCC AGAATACAAA ATAGAGAACC ATTGAGGAAT ACATAGACTT TGGTCTTTGG
  TTGCCACACG TGTGCAAACT TGCACTTGTA CAGACTCATA C                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss146510378	ENSMUSSNP241877	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs47929446					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:191477075 () rs orientation: forward

Symbol	Name	Function Class
Lpgat1	lysophosphatidylglycerol acyltransferase 1	within coordinates
Tssr10784	transcription start site region 10784	1823 bp downstream