rs47932390 SNP Detail

Summary

• ID
  rs47932390
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr10:74877713 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAAGAGGAA CTCTAAAGAG
  ACTGTAGGCC TGACATTGCA GGAGAGGAGG AGGGTTGGGA AGTAGGTCTC ACCACCCTGA
  TGGCCAGTTT GTGTTACTGA GACGCGGCAT TGCAGGACGG TCGGCTTGCT TGTCTCCATG
  TCTGTGTGTC TTCCTGTAGT GGTACACGCC GGATGCCTGC CTGCAGCTCA AAGAGCACTT
  Y
  CACAGCCGCG TCAGCACAGC CTGCCAGCAC AGGAACACAG GCACTGCTGG GTAAGCCCGT
  GGTACGGAGG GAGTGGGAGC TGCAGGAGGA ATAGGAGCAC AAAGGCACGT ACACTGTCTT
  AGTTAGGGTG AACTTCTGTG AGCAGATGCC ATGACCAAGG AAATTCTTAC AAGGACAGCA
  TTTAATTGGG GCTGGCTTAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	CAST/EiJ	KK/HlJ	MOLF/EiJ	PWD/PhJ
ss52365239	NES15274435	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	T	T
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	CAST/EiJ	KK/HlJ	MOLF/EiJ	PWD/PhJ
rs47932390					SNP	C	C	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52365239	NES15274435	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:74877713 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm66084	predicted gene, 66084			within coordinates
Rab36	RAB36, member RAS oncogene family			Coding-Synonymous
				Noncoding-Transcript-Variant