rs47935377 SNP Detail

Summary

• ID
  rs47935377
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:165918486 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTTCATCCA TTGTAAACAT TTCTTAGGAG CTGGTCCTCT
  TGAGACCAGG CTTGGTGTTT AGTTTCAGGA GATACAGCCC AGAGTATAAG CTATCCTTCT
  R
  GAGTTTACAT CCGAGTGGGG TCAGACAGAC AAATTGACAA GCTGATAATA AGCGAATAAT
  ATCCTGAGTG TTCTAAAGTG CCATTTGTTT ATTACATCT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss146012384	ENSMUSSNP102791	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs47935377					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:165918486 () rs orientation: forward

Symbol	Name	Function Class
Gm37923	predicted gene, 37923	1498 bp upstream
Rr422527	regulatory region 422527	1933 bp distal
Rr422528	regulatory region 422528	919 bp distal