rs47939203 SNP Detail

Summary

• ID
  rs47939203
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:70213035 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTTA GGCTAAGACT CCTGTCCCCT
  R
  ACAAGATGGC CCTCCCTTCT GTCTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss136606022	ENSMUSSNP205403	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss322999473	CHEV_9_70153560	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs47939203					SNP	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:70213035 () rs orientation: forward

Symbol	Name	Function Class
Gm68929	predicted gene, 68929	404 bp upstream
Myo1e	myosin IE	Intron
Rr401496	regulatory region 401496	599 bp downstream
Rr682349	regulatory region 682349	415 bp distal
Rr682350	regulatory region 682350	314 bp distal