rs47951307 SNP Detail

Summary

• ID
  rs47951307
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:153562403 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGCTGTGTG TATGTGTGTG
  TTTCTGTGTG TGTGTGTGTG TGTGTCTGTG TGTGTGTGTG TGTCTGTGTG TGTGTGTCGG
  TCAGAGGACA CGCTGTGTGA ATAAGTCTCT CATTTCAGCT TATGGGTTCC AGGAACTGAA
  CTCAGAAGGT CAAGATTGGC AGCAAGTGCT TTTACCTAAT GAATCAGCTT GCTGGCCCAA
  R
  ATAAATAAAA TTAAATGAAA GAATAGTATT CCCTGGTAAT GGTCAAGAGA AGCAAATCGG
  TATTGTCTTT CTGTTCCCTT TTATGTAATA AGGGTGGACA CCCTTGTAGA AAGACAACCA
  GACAGGAGTT GATGAGTAAA AGCCAGAGTG CTGAGCACTG GACGCAGAGC TGCTCATGAT
  CCCTGCTCCA GGACCACTTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136114467	ENSMUSSNP1285196	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47951307					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:153562403 () rs orientation: forward

Symbol	Name	Function Class
Msh4	mutS homolog 4	380 bp downstream