rs47958583 SNP Detail

Summary

• ID
  rs47958583
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:48229353 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTGT TTAGAGTCTA ATCTAAAGCT
  G
  TATGACCTGA CCATTGCATT AATGT                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	LG/J	SM/J
ss136451583	ENSMUSSNP1621096	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss322953157	CHEV_9_48126136	CHEVERUD	SCREENING_POP	f	SNP		G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	LG/J	SM/J
rs47958583					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:48229353 () rs orientation: forward

Symbol	Name	Function Class
Nxpe2	neurexophilin and PC-esterase domain family, member 2	within coordinates
Nxpe4	neurexophilin and PC-esterase domain family, member 4	within coordinates
Tssr89370	transcription start site region 89370	1318 bp downstream