rs47959028 SNP Detail

Summary

• ID
  rs47959028
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:175306126 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATCAG CATAGGCAAC AATCCCCTGA
  A
  TCTGACGTTT ATGTTGCCGT ATTTG                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss146321485	ENSMUSSNP2468035	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
ss320151336	CHEV_1_177408691	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs47959028					SNP	A	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:175306126 () rs orientation: forward

Symbol	Name	Function Class
Rgs7	regulator of G protein signaling 7	within coordinates
Tssr15391	transcription start site region 15391	850 bp downstream
Tssr15392	transcription start site region 15392	979 bp downstream