rs47963066 SNP Detail

Summary

• ID
  rs47963066
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:8997662 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCACATCTCT ATCCAGTCAC
  CATGCTTGTG ATATCAATGG AGTATGTTTG CTAAGTGAAC AGACCAGTGT TTGTTTAACC
  ATTTCTTTGC AGTTAGATGT TCAGGTAGTT TCTAATATTG CAGTTATGAA TGGTGCTTTC
  TCATTTTTGT TTACATATAT GACCATTTCT TAAGGAAAGG GTATCAACGT AGATTTAGTG
  R
  ATACGGCTGT GGATGGTACC ATTAACTTCC TAATAGGTGT AGTTTACATA TCTCATACAT
  CTCAAGCTAT ATCAGTGATG CCAACTTTAA TATTTGAAAG GAATGACTGT TCCTGTCTTG
  CATTTTATAT TTAAATAGCT TCCAATTTAC AGGAAAACTA CTTCAAAGAA CTAGTGTCCA
  TTCTTTCCCC AAAGGAGAGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ
ss52140099	NES15248680	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ
rs47963066					SNP	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52140099	NES15248680	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:8997662 () rs orientation: forward

Symbol	Name	Function Class
Gm67478	predicted gene, 67478	within coordinates