rs47967929 SNP Detail

Summary

• ID
  rs47967929
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:26748656 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTCT CCTTTCCTGG GGACTCAGGA
  Y
  GGGTGGGAGT TTATCTTACC AAGGC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss145405255	ENSMUSSNP6390912	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss325342242	CHEV_17_26666627	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs47967929					SNP	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:26748656 () rs orientation: forward

Symbol	Name	Function Class
Gm34606	predicted gene, 34606	within coordinates
Rr329984	regulatory region 329984	256 bp distal
Tssr146959	transcription start site region 146959	2000 bp downstream