rs47978686 SNP Detail

Summary

• ID
  rs47978686
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:12583059 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTCC TCACTGTGCC TTATTCTCTG
  A
  CAAACCCCAA AAGAGAACTA GGCTG                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss137142569	ENSMUSSNP4837380	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs47978686					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:12583059 () rs orientation: forward

Symbol	Name	Function Class
Rr266588	regulatory region 266588	1260 bp distal
Rr266589	regulatory region 266589	1543 bp proximal
Rr386869	regulatory region 386869	1434 bp downstream