rs47985967 SNP Detail

Summary

• ID
  rs47985967
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:28400593 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCCCTGAGGG TAGAGAGCAA GCTGGAGACT AGAAAAACAA
  CAACTGAGAC CACAGGCTTC ATGCTGGAAT GAGCACAGGA CCTCACACAG GGCCACTTGG
  R
  TGGACCAGGC AAGGAACACA CCAAAGATAA CCGCCAGACT ATCACCACAG GGATTGAACA
  GGGAGACTAG CCTGAGATGA CCAGCAGTCT GGCACTGTGA                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
ss61585206	NES17539342	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
rs47985967					SNP	G	G	G	G	G	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61585206	NES17539342	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:28400593 () rs orientation: forward

Symbol	Name	Function Class
Gm25564	predicted gene, 25564	200 bp downstream