rs47986469 SNP Detail

Summary

• ID
  rs47986469
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:37560660 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGGAAGAGG ACATGTGTTC
  CAAAAGGCTG AATTCCACCT TTCTGAAAGT CAGGACACTA CGATTTATCG CCATTAACGA
  ACAATTAAGG GGACAAACCT CTGGACTGGT CACTGGGTCG AGTTTGGTAA CCCAGGGGGT
  TAATGACCTC AGGGTCATCC CAGGAAGTAG ACCAGATCTG GGTGATCATC AGCCTCAGCA
  C
  AGCCTGGCAG AGCTGCCTAG CACTGCTCAT GGCAAGAGGA AGCCAGGCCA TCTTCCATGC
  CTTATAAGCA GTGATGGCAA GGACCATGCC TCTGACCCTA ATCCAAGCTT GTCAATAGTC
  TCCAAAACAA TCTTTCAGGG TGAATCTGTG GTCGAAGGCC CAGAGGACAG GCAGACATTT
  TTTGGGCCCA GTGGTTTGCC                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss144489830	ENSMUSSNP6121519	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs47986469					SNP	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:37560660 () rs orientation: forward

Symbol	Name	Function Class
Ccnq-ps4	cyclin Q, pseudogene 4	1197 bp upstream
Gm18267	predicted gene, 18267	within coordinates
Gm63788	predicted gene, 63788	1785 bp downstream
Gm64931	predicted gene, 64931	1462 bp upstream