TTCTAACCTA CCACATTGGG GCCATCTGTA GTGGTGAGCT TTGCTACACC ACTTTGGTTC CAGGCAGGCT GCACATGCAG GCAGCTGTTG GGAGCTATTA M GACAACACTA TTGTCCTGAT CTCTGAATTG GGCCTCTCCC CCCGCCAGAA GAAAAGGGGG TCAAAAGCGG GCCACCTACA TACCACTCCG AGAACAACC M = A/C Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|
ss148780125 | ENSMUSSNP6567973 | ENSEMBL | ENSEMBL_Sanger | f | SNP | C | C | A | ||
ss322148802 | CHEV_7_34961250 | CHEVERUD | SCREENING_POP | f | SNP | C | A | |||
SNP Consensus Information | ||||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
DBA/2J |
LG/J |
SM/J |
||||
rs47991179 | SNP | C | C | A | C | A |
Location: Chr7:33875656 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm12778 | predicted gene 12778 | 187 bp downstream | ||||||
Gm12783 | predicted gene 12783 | 527 bp upstream | ||||||
Rr380644 | regulatory region 380644 | within coordinates |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/10/2024 MGI 6.24 |
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