rs48001745 SNP Detail

Summary

• ID
  rs48001745
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:71368975 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTTTACCCA GCTTAGAAAA
  AGTAAGTACT TAGCCACAAA GACCTATGTA GTCATTCTTC ATTTGTACAT GGGGCCTTTC
  TGGTTCTCTG GTGGAGTTGG TTATTTTGTG TTTAACTGGT TTTTAGTGAC CAAAGGCATT
  CTATAAGGCC TTAAGAATAA GGTTTTTGAC ATACCAAGAT ATATATATAT ATATTTAAAA
  A
  TTTTTTAGGT CAACAGTCTC AGAGATGTTT CTCTTAATTT ATCTACTTTG GAGTTCTCTG
  ACATCAGGGA TAAATTCAGA TTCTGCATCC ATAGGGGGCC AGGCTGTGGC TGTGTGATCT
  CAGAATTATC TTTTCCCAAG ATAAGCTTTC TGTTTCCTCT GGGACCAGCA AGTGTTGAGT
  TACTCTTCCT ATGTTCATCC                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss137871032	ENSMUSSNP1679602	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48001745					SNP	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:71368975 () rs orientation: forward

Symbol	Name	Function Class
4930474H06Rik	RIKEN cDNA 4930474H06 gene	515 bp upstream
Rr267972	regulatory region 267972	226 bp proximal