rs48003506 SNP Detail

Summary

• ID
  rs48003506
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:107457074 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAGGTGGTGT AAAGTTTGAT TGACTGAGAG GAAGATATCA
  TTAATATCAA GTTTGATTGA CTGAGAGGAG ATATCATTAA TATCAAGGAA GCTTTGACTG
  Y
  TCTCCTTTGA AATCCACACG TGAAAAACAC GTGTGGATTT CGCTCCCTCA GTCATGTCTG
  GATTTGCCAG TTTCTGAGTT GTATCTGCCA ATTTAACAA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145102856	ENSMUSSNP2613965	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs48003506					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:107457074 () rs orientation: forward

Symbol	Name	Function Class
Serpinb10	serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 10	within coordinates
Tssr8339	transcription start site region 8339	330 bp downstream
Tssr8340	transcription start site region 8340	286 bp downstream