rs48005162 SNP Detail

Summary

• ID
  rs48005162
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:120755054 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T TAATCATCAT GGAAATGCAA ATCAAAACAA GCCTGAGATT
  CCATTTCACA CCAGTCAGAA TGGCTAAGTT CAAAAATTCA GGTGACAGCA GATGCTGGCA
  A
  TGATGTGGAG AAAGATGAAC ACTCCTCCAT TGTTGGTGGG ATTACAAGCT TGTACAACCA
  CTCTGGAAAT CAGTCTGGCG GTTCCTCAGA AAATTGGACA T                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss134396144	ENSMUSSNP2390597	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs48005162					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:120755054 () rs orientation: forward

Symbol	Name	Function Class
Rr395603	regulatory region 395603	656 bp upstream