rs48007583 SNP Detail

Summary

• ID
  rs48007583
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:73126010 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAAAA CAGGGCCTAA TTCCCCGATC
  S
  CTGTAACACG GTGACAGGGA TATCA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss132423034	ENSMUSSNP6959239	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C	C
ss323746047	CHEV_11_73048686	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs48007583					SNP	G	C	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:73126010 () rs orientation: forward

Symbol	Name	Function Class
Rr251456	regulatory region 251456	192 bp proximal
Trpv1	transient receptor potential cation channel, subfamily V, member 1	within coordinates