rs48012731 SNP Detail

Summary

• ID
  rs48012731
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:32664848 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAAGACCAAG TGTTTTAACT GTATTCCAGA GGAGTTCAGA
  GTCACTGTTT GAACAAGTAA ATGGAACTCA ACACTTGGAC ACTTGAAATT AGAAGTTCTA
  Y
  TGCAGTCACA TGTATGGGAT AGGGACATTG TCCTATTGAG AGGAATACTC TGGGCTCAGA
  AAGACAGCAC ATATTCTCGC TTACATGTAG ACACTGAAT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss136251119	ENSMUSSNP6498086	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs48012731					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:32664848 () rs orientation: forward

Symbol	Name	Function Class
Ets1	E26 avian leukemia oncogene 1, 5' domain	within coordinates
Tssr84300	transcription start site region 84300	692 bp downstream
Tssr84301	transcription start site region 84301	905 bp upstream
Tssr84302	transcription start site region 84302	1094 bp upstream
Tssr84303	transcription start site region 84303	1208 bp upstream