rs48014521 SNP Detail

Summary

• ID
  rs48014521
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:161343456 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGCAAAGAGA AAAAATCAGT ATAGTGGACA GAACTAGGTG
  AATACAAAAA TCACAGGAAG CCCAGTGTAT TGTTATCTCT TAAATGAGTT TTACCAACTA
  S
  TCCTGTAGGA ATTCATTTAA TGAAATGCCT TTGTCATAAA TTCTTTCCTG TCTTTTAACT
  CTCTAGATAT CCAGGCAGAG TTGGATATAT TTCCAACTA                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145915552	ENSMUSSNP1299224	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48014521					SNP	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:161343456 () rs orientation: forward

Symbol	Name	Function Class
Gm31815	predicted gene, 31815	within coordinates
Rr421813	regulatory region 421813	1452 bp proximal