rs48026168 SNP Detail

Summary

• ID
  rs48026168
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:12218082 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTGAGGGAC ATTAAAATAC
  AGTCAAATGA GAAACTCCAA AGGGAAGAGA AAAGAGGTGA GGTGCAGTTT GTAAGGCTCC
  AGGAGTCTTC TGGCCTCCTC CCCTGTGGTG CGGGCTGCAG CAGCTCCGTC CTTGCTTGTG
  TCTTTGTACA ATGTCTATGT GTCTGTTCTC CAGCAGAGAA AGGCTGAAGC CCCCCCCCCC
  T
  CCCCAGCGTC AGGCTCTTGC GCCACCCACT CACTGGTCTT GTTGAGTGCT GCTGGCTTCA
  GACAGAGAAG GATGTGTGAG GCCCATTTCA GGATAGGATC TCTTCTCAGA AGGCAGCTGC
  AGGGAGGCAT CCCCTGAGGG GCTTTTGGAT GCCTCTTGGG AAGGGGGATG GAGGAGTCAA
  GATTAGGCCC GCATTGATTC                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss147080827	ENSMUSSNP5599012	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs48026168					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:12218082 () rs orientation: forward

Symbol	Name	Function Class
D15Mit1005	DNA segment, Chr 15, Massachusetts Institute of Technology 1005	322 bp proximal
D15Mit1006	DNA segment, Chr 15, Massachusetts Institute of Technology 1006	186 bp proximal
Mtmr12	myotubularin related protein 12	within coordinates