rs48048568 SNP Detail

Summary

• ID
  rs48048568
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:27259932 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGGC CGGCCCAGCC CAGGATCCTC
  Y
  GCTCCCGTGA GGTCAGGGTA ACACA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325345388	CHEV_17_27177903	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs48048568					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:27259932 () rs orientation: forward

Symbol	Name	Function Class
Gm65707	predicted gene, 65707	1420 bp upstream
Rr392460	regulatory region 392460	within coordinates
Tssr146998	transcription start site region 146998	1406 bp upstream