rs48057367 SNP Detail

Summary

• ID
  rs48057367
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:35500054 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGTTCCTTT TAGTTATAGC
  AGTATGGCTA CATGTAGAAC TGAGCGAAAT GATTCATGTG GGCTTGAAGA AAGGCTCTAA
  TTTTCTGGGT ATATACAAAG AGAGAAAGAC GATATAAAGA AATCTTCTTT TAGAGTATGC
  ATTTCGTTTT TCCAACTAAG TAAATAAACA AACAAAACCC CACACCAAAA CAACAGAAGC
  R
  ATGGCCAATG AATTTCACAC TCTTTCAGAC ATCTGTTTTA GCCAAAAGAA GGTAGGGTTC
  CTCTGTTCTC TGAAGTGCCC TGGCTGCATG ATCCAGGCGA GTCACTCTTT GTTTTAGCTT
  CTTCTGGTGT GAAATGTGAG GGGAAAGCTG GATGAACTTT TAGAGATGGA ATCACAAACT
  GCCTATTAAA AGTAACCTAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss60995117	NES16129135	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	AKR/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs48057367					SNP	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60995117	NES16129135	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:35500054 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18877	CpG island 18877	1744 bp proximal
E130304I02Rik	RIKEN cDNA E130304I02 gene	1963 bp upstream
Gm73276	predicted gene, 73276	625 bp downstream
Rr645475	regulatory region 645475	1557 bp proximal
Rr645476	regulatory region 645476	1974 bp proximal
Zfp507	zinc finger protein 507	Intron