rs48058511 SNP Detail

Summary

• ID
  rs48058511
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:104307873 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTAAG TAGCTCAGAG ACGGTAATTG
  R
  GATATGGAAG GTAGTATAAC TACAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss138019002	ENSMUSSNP4082667	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48058511					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:104307873 () rs orientation: forward

Symbol	Name	Function Class
Serpina3k	serine (or cysteine) peptidase inhibitor, clade A, member 3K	within coordinates
Tssr114848	transcription start site region 114848	1126 bp downstream
Tssr114849	transcription start site region 114849	1093 bp downstream
Tssr114850	transcription start site region 114850	1049 bp downstream
Tssr114851	transcription start site region 114851	976 bp downstream
Tssr114852	transcription start site region 114852	944 bp downstream
Tssr114853	transcription start site region 114853	744 bp downstream
Tssr114854	transcription start site region 114854	574 bp downstream
Tssr114855	transcription start site region 114855	1450 bp upstream
Tssr117574	transcription start site region 117574	705 bp upstream
Tssr117575	transcription start site region 117575	1486 bp downstream