rs48067035 SNP Detail

Summary

• ID
  rs48067035
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:15895763 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGGTCACAG ATCAAGCCAG TGAGAAGGCA CAGGAAGACC
  TATCGGCTGG AAAGAGGTGG TGACTGAGGG GGAATTTAGG GAAAAGACCT TAAAGTGACT
  T
  GGGTAGGGAC AGGGAAGGTG CCCATGCCAC CACAGGGCTG GGTACAAAGG AAGCAGCTGC
  CCTCCCTGGA CACAAGATGA GCAGAGGCTG CAGTGGCCC                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148378208	ENSMUSSNP3495629	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
ss322108795	CHEV_7_16747187	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs48067035					SNP	T	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:15895763 () rs orientation: forward

Symbol	Name	Function Class
Rr155078	regulatory region 155078	163 bp distal
Rr160786	regulatory region 160786	238 bp proximal
Rr164335	regulatory region 164335	819 bp distal
Slc8a2	solute carrier family 8 (sodium/calcium exchanger), member 2	775 bp downstream
Tssr64587	transcription start site region 64587	1644 bp downstream
Tssr64588	transcription start site region 64588	1628 bp downstream