rs48069252 SNP Detail

Summary

• ID
  rs48069252
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:72502228 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATAA ATCTTTTTTT TTTTTAATTT
  T
  AAAAAAAAAT AGTATGTTGT AATTA                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss136622580	ENSMUSSNP2344183	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss323002640	CHEV_9_72442753	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48069252					SNP	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:72502228 () rs orientation: forward

Symbol	Name	Function Class
Gm37105	predicted gene, 37105	within coordinates
Rfx7	regulatory factor X, 7	within coordinates
Rr682776	regulatory region 682776	436 bp distal
Rr682777	regulatory region 682777	63 bp distal