rs48070226 SNP Detail

Summary

• ID
  rs48070226
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:40830838 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATGGAATA AAGGAAAATC
  CACTGGAGAA AAATACAGCA AAATTAAATA GTAAATTACT GACCCACCAA GCAGATTCTG
  GGAAATTACT CAAGGGTTCT ATCCCATGTC ATTCTGTTAA ATATTCTGGT GAGAAAAGCA
  GAACATAAAA CAAACTCTGC TCTCAAAAAA AACTCTGCTA GGAACAATAG CCAGTGAAGC
  R
  CAACCACTTC TGGCCTCATT CATTACAAGC CCCGCCCTCC ACGCAATGAA ATCTGAAGAC
  TCTTAAGAAG CACAGAGAAA GGCACAGGAG CCTGAAAGAG GAGTGAACCA GTACGAAAGC
  CTATGGAAAA AGGTAGCTGT TGCCTGTGCT TGGGTTCTAC TAGCTGGGCT GCTTTGTCTG
  ACCTCAGTGG GAGAGGAAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss145609467	ENSMUSSNP7095228	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs48070226					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:40830838 () rs orientation: forward

Symbol	Name	Function Class
Esp8	exocrine gland secreted peptide 8	75 bp upstream
Gm49847	predicted gene, 49847	210 bp downstream
Rr337560	regulatory region 337560	1098 bp distal
Rr392616	regulatory region 392616	543 bp downstream
Tssr144637	transcription start site region 144637	72 bp upstream
Tssr144638	transcription start site region 144638	83 bp upstream