rs48074470 SNP Detail

Summary

• ID
  rs48074470
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:76021339 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTCC GTTTGCACTT GGATTTCATT
  W
  TGCTTAGTCA GTCTGATTTC TCCAC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	MSM/Ms	SM/J
ss144640617	ENSMUSSNP3737720	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		T
ss324437430	CHEV_13_76010668	CHEVERUD	SCREENING_POP	f	SNP			A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	MSM/Ms	SM/J
rs48074470					SNP	A	A	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:76021339 () rs orientation: forward

Symbol	Name	Function Class
Rhobtb3	Rho-related BTB domain containing 3	within coordinates
Rr277199	regulatory region 277199	1861 bp proximal