rs48075824 SNP Detail

Summary

• ID
  rs48075824
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:120756164 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATGGCCTA GTTGGCCATC
  ACTGGAAAGA GGCCCATTGG AATTGCAAAC TTTATATGCG CCAATACAGG GGAATGCCAG
  GGCCAAAAAG TGGGAATGAG TGGGTAGGCG AGTGGGGAAA GGGTATGGGT TTTTTTGTGA
  TAGCATGGGT GCCGCAGACC TTCTGGGTCC CTGTGTCTGC GTGGAACGGG GTCTCTTGAC
  R
  CAGGTGGGCA AAGCGTGGAT GAGCGACAAA CAGACACACA CACAGGAGTG TTCGTGTGGA
  ATCTGAGTGT AATTTTACAA CTCGAGCATC AGACTTTTTA TGCAGAGGAC AATAAGGAAG
  TTGGGTGACA TATTCGCAAG GTACAATTGA GGTAACCGGA ATCTTACATA AAACAGAGGA
  ATGCAAACAC AAAAGGTCTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss134396168	ENSMUSSNP1276287	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
ss325960957	CHEV_X_118960076	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs48075824					SNP	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:120756164 () rs orientation: forward

Symbol	Name	Function Class
Rr395603	regulatory region 395603	within coordinates