rs48076437 SNP Detail

Summary

• ID
  rs48076437
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:97939110 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAACCTGGAA CTTCAAAATA
  ACAAAAATTA GTTCCCAAGC TTGCCTTGTC CAATACGGAA GAAAGATAAA GATGGGGAAT
  GGACAGCAGC TATTTAAGCA CAGTCAGCTC TACTGTTTGA TCATAATCAG CACATGCATG
  TTTACTCATG TTTCACTTAG TAAAGGTAGT AGTAATGCCA TGCATCTATT TTATAAGTAG
  K
  CCCTGTATAG CTAAATACCC AACTATGCAT ACTCTCCCTA AAGATCTGAT ACAATGCATT
  ATGTGTCAAT TTATCTACTT GTCAGTATAA TGTATTCCTT ATCTAATTCA TTCGACTTTG
  TGGAATTCTT ACAGGGAAGA GGAATTACAT TTTTCATGAT ATTGTTCCCA GTGCTGGGAC
  TATGCCAGGA GTTCAGTGAC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss137982502	ENSMUSSNP5240516	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs48076437					SNP	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:97939110 () rs orientation: forward

Symbol	Name	Function Class
Rr258643	regulatory region 258643	1291 bp proximal
Rr269010	regulatory region 269010	1056 bp proximal