rs48085908 SNP Detail

Summary

• ID
  rs48085908
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:51744165 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTTTTTT TTTTTTTTTT
  TTTAATTTTC TTTTCCAGGA CTAGAAATTG AACCCAGGGC TTTGTGCATG CTAGGCTAGC
  ACTGCTATTC TCTTCCCAAC CCTTCTTTTT GACATGTATT TATGTGGGGA GGGGAGGTGT
  AGGGGGGAAT ACACATGTGC ACATACACAG ACATATATCA GGGCATATGT GGAGATCAGA
  R
  GGCAACTTGG TGGAGTCATT TCTTCTGCCA TATGTGGACA AAGTGGGAGG TGTCAAATAC
  AGGTCATCAG GCACAACAAA CACCCTTCAC CCACTGGGAC ATCTTGCTGA CCCTACTTTA
  TATTTTGACA GTGTCTGGCT AAGCTGCCCA GACTGGCTAG ACTCTGGCCA GGACAGGGCT
  TGAATTTGTG AGTCTCTTGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss137724545	ENSMUSSNP836217	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48085908					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:51744165 () rs orientation: forward

Symbol	Name	Function Class
Ap4s1	adaptor-related protein complex AP-4, sigma 1	within coordinates
Rr256575	regulatory region 256575	1765 bp distal