rs48092819 SNP Detail

Summary

• ID
  rs48092819
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124020120 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACCTAAAA TAGAAGAAAA
  TTACAAAGAA TATAGCTTTA GTTTTCCCAT AACTTTACCA CAAAATAATA AGTTTAAATC
  ACATCTTCAT GAACAAATAC TTTCTTCTCA AACAAAAAGT CAGCATCTAT CATGATGAAT
  TTTGAATCAT ACTTGTGTTG GAGATAAGAA TATTAGCTCT GATACAAATA TTGATTACTC
  R
  AGGTCAACTT TAAGAAATTA CTAACAATTC TTGCTAACAT ACAAGAACGT GGACTTGCAG
  GATTTAGAGG CACACCTAGC CTATCATCAT TTATTTTTGT GCTTGAAACA AACATAAAAT
  CATGAGCACT CTAGACTATT AGCCAAGACA AACATATTTT GTCAATTATA ATGCCCTTTA
  AAAATTTAAA ACTGTGTTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320926416	CHEV_3_123929389	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs48092819					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124020120 () rs orientation: forward

Symbol	Name	Function Class
Rr584579	regulatory region 584579	271 bp distal