rs48094463 SNP Detail

Summary

• ID
  rs48094463
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:67998881 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCGC CAGAGCAAAG GTGCTTGTCA
  Y
  TCAAGCCTCA TGACCCATGT TGAAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss147147144	ENSMUSSNP2188249	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
ss323351821	CHEV_10_67625799	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48094463					SNP	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:67998881 () rs orientation: forward

Symbol	Name	Function Class
Arid5b	AT-rich interaction domain 5B	within coordinates
Gm51770	predicted gene, 51770	within coordinates
Gm66190	predicted gene, 66190	within coordinates
Gm66212	predicted gene, 66212	1765 bp downstream