rs48100138 SNP Detail

Summary

• ID
  rs48100138
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:94268115 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                      A ACTCAGTGCT CCAAGGTATG CTAATCATAA AACAGATAGA
  GACATTCCTC CACCCACAAG CTTCCTGGGT TCAAGGAGTG TACATTCAAA GAAAGTCACC
  C
  TGACCCACCC TGACCATTGC TGGAACCTGC AATGCAAATA TACTATCCTT AGGGGCTCTT
  AGAAACTGTC TTGAGAGTTA ACAATTACCA GGTATTCCTA G                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss148798812	ENSMUSSNP196842	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs48100138					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:94268115 () rs orientation: reverse

Symbol	Name	Function Class
Rr382481	regulatory region 382481	within coordinates