rs48102275 SNP Detail

Summary

• ID
  rs48102275
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:59203220 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACTTGTCCC AGCATGGGCA AAAGAACATG GCTTCTCCTT
  CCTCCTCAGC AGGGTGTGGT TCTTGAGTGG GTCTTCAGCC CACCTTGCTC AGGAACACAC
  C
  CCCCCCCCCA GCCCTCAAGA CTCTTAAGTC CTTTCTATGT GTTTCTTTCT TTAAACATCG
  GCTGGCATCT TTGAAGTATG AGCCTGTACA TTCTGTGTA                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss149070596	ENSMUSSNP4409589	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss324355720	CHEV_13_59156767	CHEVERUD	SCREENING_POP	f	SNP			C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48102275					SNP	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:59203220 () rs orientation: forward

Symbol	Name	Function Class
4930415C11Rik	RIKEN cDNA 4930415C11 gene	within coordinates
Ntrk2	neurotrophic tyrosine kinase, receptor, type 2	within coordinates