rs48102299 SNP Detail

Summary

• ID
  rs48102299
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:105214935 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGTGCCTTGG AGCAGATCTC
  ATGCAGGCTG GTGGCGATGT TCTTGGCAGG TGCCTCACAG CGAAACACGT GGCACTTGAG
  CATCTGGGTC AGCTTATCTC GAGCTACGTA GGCAAAGTCC CTGTTGGGGG AGGGTCACCT
  CAGTGTCTCC TAGAACCATC AAATGCCATG CCTGGCCACC GTCCCACCCA CAACCTCCCT
  G
  TCCATGACAG CCTACAGGGT TTGGCCCTGG TGTTCTGTAG GTTCTGCCTT AAGGAGCTGG
  GGCGGACAGA GAGGCAAGCA TGCTGAGGTG GGGGACAATG CCCAGCACAG CGGGTGGGGA
  AGGGACAGGG CACACAGAAA GGGAGCCTTG GTGCTTCACA GCATCCAGTC TAGGTGTAGG
  AGGAGGAGGC ACAGTCAAAG                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss145608125	ENSMUSSNP874927	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs48102299					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:105214935 () rs orientation: forward

Symbol	Name	Function Class
Apbb1	amyloid beta precursor protein binding family B member 1	within coordinates
Tssr74041	transcription start site region 74041	239 bp upstream
Tssr74042	transcription start site region 74042	205 bp upstream
Tssr74043	transcription start site region 74043	139 bp upstream