rs48109737 SNP Detail

Summary

• ID
  rs48109737
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:89620377 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTCAGTTTC ATGTGTTTTA CAAATTGTAT CTTATATCTC
  GGGTATACTA AGTTTCTGGG CTAATATCCA CTTATCAGTG AATACATATT GTGTGAGTTT
  T
  TTTGTGAATG TGTTACCTCA CTCAGGATGA TGCCTTCCAG GTCCATCCAT TTGCCTAGGA
  ATTTCATAAA TTCATCCCTT TTAATAGCTG AGTAGTACT                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147261972	ENSMUSSNP5994613	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs48109737					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:89620377 () rs orientation: forward

Symbol	Name	Function Class
Bltp3b	bridge-like lipid transfer protein family member 3B	within coordinates
Tssr95182	transcription start site region 95182	1322 bp upstream