rs48111995 SNP Detail

Summary

• ID
  rs48111995
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:104704494 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTACGGGGA GATGACGCCC
  ACATTTCGGG GGCTCAGGCG GGCTTTACCC TTCTTGGAGG AAGGGGCCAG GAGTTGTTTC
  AGGTATGACG TCACTGTAGC AGCCTCTTCA GGGTTGAAGA AGGATGGGCT ATTGCCTTCT
  CTCTCATCTT TGCCCATTAC ACCATGGAAA ATGATGGGGA AGCCCTGGAC GCCATGAAAT
  R
  AGAGGAAACC TTCAGGCTCA TCTCCCTGCC TCCCAATCCT CCAACCCAGC TAGAGAATCA
  GGGGTTCCAG ACTGTGCTCT GCCTGCTAGG CCTCACCTGC TGAGGCAGCC CCTCCCAGCG
  GCAGAACCGT TCTCGATCCA CCACATCTGC GCAGGCCTGC AGCTCTCCGT CGTAGTACAG
  CTGGTTAGGG ATGTCCAGGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60431827	NES15936279	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	G	A	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs48111995					SNP	A	A	A	A	A	A	A	A	A	G	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60431827	NES15936279	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:104704494 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Mov10	Mov10 RISC complex RNA helicase			Intron
				Noncoding-Transcript-Variant
Tssr31063	transcription start site region 31063			1271 bp downstream