rs48123635 SNP Detail

Summary

• ID
  rs48123635
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:92306685 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T GGTCATGATG TCATATCACA GCAATAAAAA ATAACTAATA
  CATCTACATA GCAAGTTATA GGACATCTAA GACTACATAA TGAGACTGTG TCAAAACTTT
  Y
  TCTCTTACAC ACACACACAC ACACACACAC ACACACACAC CAAAGAGGGA TGATACAGTG
  CTAAGAAAAT GATGTAATTA GTAAAGTGTG GATACATAAA C                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss134246226	ENSMUSSNP6576098	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs48123635					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:92306685 () rs orientation: forward

Symbol	Name	Function Class
DXMit128	DNA segment, Chr X, Massachusetts Institute of Technology 128	within coordinates
Gm61792	predicted gene, 61792	within coordinates