rs48124281 SNP Detail

Summary

• ID
  rs48124281
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:50584430 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGTT ACTGTAAGAC TGCTCTAAGT
  S
  TCCCACGGAT GCTTCTGCTC CTCTG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss146533757	ENSMUSSNP4348742	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss320289775	CHEV_2_50549938	CHEVERUD	SCREENING_POP	f	SNP			C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs48124281					SNP	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:50584430 () rs orientation: forward

Symbol	Name	Function Class
Rr556759	regulatory region 556759	178 bp distal
Rr556760	regulatory region 556760	462 bp proximal