rs48126858 SNP Detail

Summary

• ID
  rs48126858
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:76792899 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGGATGCT CCTCCACTGA
  GTATCTCCCA ACCCTGGCTC ATCAAGTCTG CCAGATTAGG TGCATCCTCT TTCACTGGGG
  CCAGATAAGG CAGCCCTCCC TGTTGGTGAA ACGATGTCAC AATGAAGCTA GAGCTTTAGG
  GAGAGTCTCC ACTCCAGTTG TTGGGAGGCC CACATGGAGA CTGAGCTGCA CATCTGCTAC
  W
  TATGTGCTGC AGGCCTTATT CCACCCCGTG TGTGTTCTTT GGTTGGTGGA TTGGTTTCTG
  AGAACTCCCA GGGGTCCAGG TTAGTTGACT CTATTGGTCA TCCTGTGGGG TTCCCATCCT
  CATCAGGGCC TTCAATTATT CCCCCAGCTC TTCCATAAGA GTCCCTGACC TCAGTCCTAT
  GTTTATCTGT GGATTTCTGC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss144717380	ENSMUSSNP7160463	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs48126858					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:76792899 () rs orientation: forward

Symbol	Name	Function Class
Gm70762	predicted gene, 70762	within coordinates