rs48135503 SNP Detail

Summary

• ID
  rs48135503
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:102335498 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTTT TCTTACAATA TCCTAATGTC
  A
  TGGTACGTTT AATACAGAGT TATCT                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
ss145571390	ENSMUSSNP3826208	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A		A
ss322357785	CHEV_7_109834805	CHEVERUD	SCREENING_POP	f	SNP				A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	MSM/Ms	SM/J
rs48135503					SNP	A	A	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:102335498 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19528	CpG island 19528	683 bp proximal
Gm45527	predicted gene 45527	72 bp upstream
Trim68	tripartite motif-containing 68	within coordinates
Tssr73953	transcription start site region 73953	961 bp downstream