rs48141945 SNP Detail

Summary

• ID
  rs48141945
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:75555569 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGTTGCTGG GAATTGAACT
  CAGGACCTCT GGAAGAACAG CCAGTGCTCT TAACTGTGGA GCTATCTCTC CAGCCTTTTA
  AAGACTGTTT AATGCTGGGC AAAGGGGAAA AATAAAGAGT AGCTTTACTA GGGGCAAGTT
  ACAAAGTAGG GCTGGACAGA GGAAGGCAAA TGGCTTTGGG GATGAGTGCT GTTACAATAG
  R
  AGGAGTGCAA CCCCAGTCCC GGGCAAGTGG AAACAGAAGC CCAATGTCAC CCTCAGCTAC
  ACAGAGGCCA GCTTAGGCTG TAGGAAACCT CATCCCAAAC AAACAAATGA ATGGATTAAT
  GTACATACTC ACGTTTTCCT GGCAGGGTTT TGAGGGATAA GCTGCCATGG GTCACAGTAG
  ACAGACTTAG CTCTGTACCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss144696832	ENSMUSSNP5046102	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs48141945					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:75555569 () rs orientation: forward

Symbol	Name	Function Class
Gm69448	predicted gene, 69448	1080 bp upstream