rs48148449 SNP Detail

Summary

• ID
  rs48148449
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:88530546 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCAAG AGGCCAGGGG CCAAGAGACA
  Y
  GTGGCAGCAC CCAAGTTTAA AGCAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss145451892	ENSMUSSNP6768641	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
ss322761669	CHEV_8_90327817	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48148449					SNP	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:88530546 () rs orientation: forward

Symbol	Name	Function Class
Tssr82324	transcription start site region 82324	472 bp downstream
Tssr82325	transcription start site region 82325	493 bp downstream
Zfp423	zinc finger protein 423	within coordinates