rs48163040 SNP Detail

Summary

• ID
  rs48163040
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:8413707 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATACATATG TAATCAATAA
  ACAAAGAATA AATATAAGAG AAGGATTGAA GAGATGGCTC AGTCAGTAAA TGCTTATAAA
  GCAAGCATGA AGCTCCAAGT TCGATTCCCA GAACACTCGT GAAAAAGGCC AGACACTCCT
  GTGATCCCAG GTACTGCGGA GACAGGAAGA AGAGGATCTT GTTGACCCAG GCTCTCTAGC
  Y
  CAGTGCTAAG CTTACTGGGA GACTCTGACT TAAAAACTAA GGTAGGCTGG GCCTGGAGAC
  CAAAACTGAG TTCTCAGCAC CATCAGGCAG CTCACAACTG CTATAACGCC AGCCTCATGG
  TAACCCACAA CCGCCGATCT CAGGCACCTG TGCACACGTG CACACAAATG CACACAATTA
  AAAGTAAAAT AAATCTGACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss137108517	ENSMUSSNP1577488	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48163040					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:8413707 () rs orientation: forward

Symbol	Name	Function Class
Gm33134	predicted gene, 33134	231 bp upstream