rs48163520 SNP Detail

Summary

• ID
  rs48163520
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:106018412 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGAATAAGT ACAAGGATAA
  GTCAATGTTG TAGTCTTGGT AAATGTGTAG TCTCTCTCAC AGGGTTCAGA TTTCAGCTCA
  TTTTCTATGA CCCTCAAGAT TTCATGAAAG TAATTCTGAC TGTAATCATG CTTTTATTTC
  CAAATGTTTT CAAGTGTTTC TCTAAATTTT AACTGAATGT TGTTGGTTGT CTTTTTGATG
  G
  ATTCAACATG ACAGGTTTCT AAACTCTTTC TAAGTAAAAG GTATTTTTTT TTCATTTGGA
  TATTTTTGTC ATACATGATT TCAAACTTTT CTCCAGACAT TATTTTTAGT CTTTCCACAA
  TATTTTTGTC CTTCTTGAAA TATTCAAGGA GGATATTTTC AGAGTCCAAA TCAATGTTAG
  GCTCTGTGAC ATGAGGGGCT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145611808	ENSMUSSNP4732150	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs48163520					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:106018412 () rs orientation: forward

Symbol	Name	Function Class
Gvin-ps6	GTPase, very large interferon inducible, pseudogene 6	within coordinates