rs48170619 SNP Detail

Summary

• ID
  rs48170619
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:156554816 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTAACAATCG CCTTCTCCAT ATTCTCACGC CCCTGAGGAG
  GTCTCTTTTG GGTGGCAGGG GGTGGGGGTT GTTTTCTGAG ACAGGGTTTC TCTATGTAGT
  Y
  CTGGCTGTCC TGGAACTTGC TCTGTAGACC AGGCTGGCGT CAAACTGAGA TTTGTCTGCC
  TCTGCCTCCC CTGTGCTATT GAGATGGGCT TAGAAGGCC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss148080897	ENSMUSSNP3145251	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss320581478	CHEV_2_156538632	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs48170619					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:156554816 () rs orientation: forward

Symbol	Name	Function Class
4930405A21Rik	RIKEN cDNA 4930405A21 gene	1643 bp downstream
Dlgap4	DLG associated protein 4	within coordinates